Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase | PMI12_03225 | Not Available | Negative | 3376714 - 3377241 | 19333.4 |
| vacuolar-type h(+)-translocating pyrophosphatase | PMI12_03226 | Not Available | Positive | 3377496 - 3379604 | 71618.5 |
| acyl-coa dehydrogenase | PMI12_03227 | Not Available | Negative | 3379605 - 3380063 | 16355.3 |
| acetyl-coa acetyltransferase | PMI12_03228 | Not Available | Negative | 3380074 - 3380756 | 23712.8 |
| hypothetical protein | PMI12_03229 | Not Available | Negative | 3380757 - 3380916 | 6004.07 |
| hypothetical protein | PMI12_03230 | Not Available | Negative | 3381512 - 3383549 | 69972.5 |
| short-chain alcohol dehydrogenase | PMI12_03231 | Not Available | Negative | 3383550 - 3383683 | 4405.42 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_03232 | Not Available | Negative | 3383734 - 3384720 | 34886.1 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_03233 | Not Available | Negative | 3384731 - 3385373 | 22783.8 |
| transposase, is5 family | PMI12_03234 | Not Available | Negative | 3385374 - 3385765 | 14367.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
