Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | PMI12_03215 | Not Available | Positive | 3369158 - 3369754 | 22710.8 |
| protein of unknown function (duf3619) | PMI12_03216 | Not Available | Positive | 3369751 - 3370176 | 14868.6 |
| protein of unknown function (duf3106) | PMI12_03217 | Not Available | Positive | 3370192 - 3371025 | 29117.7 |
| putative membrane protein | PMI12_03218 | Not Available | Positive | 3371039 - 3371605 | 21422.2 |
| diacylglycerol kinase | PMI12_03219 | Not Available | Positive | 3371602 - 3372009 | 14631.0 |
| tigr00730 family protein | PMI12_03220 | Not Available | Positive | 3372041 - 3372631 | 21539.9 |
| nitrogen regulatory protein pii | PMI12_03221 | Not Available | Negative | 3372677 - 3373015 | 12393.0 |
| nad+ synthetase | PMI12_03222 | Not Available | Negative | 3373012 - 3374709 | 61186.3 |
| hypothetical protein | PMI12_03223 | Not Available | Positive | 3374729 - 3375901 | 44099.0 |
| hypothetical protein | PMI12_03224 | Not Available | Positive | 3375961 - 3376713 | 27434.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
