Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in formation of curli polymers | PMI12_03195 | Not Available | Positive | 3346142 - 3346960 | 27467.6 |
| periplasmic serine protease, do/deqq family | PMI12_03196 | Not Available | Negative | 3347093 - 3348577 | 51382.4 |
| signal transduction histidine kinase | PMI12_03197 | Not Available | Negative | 3348640 - 3350025 | 49120.5 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_03198 | Not Available | Negative | 3350135 - 3350794 | 24641.1 |
| beta-ketoadipate pathway transcriptional regulator, pcar/pcau/pobr family | PMI12_03199 | Not Available | Negative | 3350846 - 3351616 | 28077.0 |
| 4-hydroxybenzoate 3-monooxygenase | PMI12_03200 | Not Available | Positive | 3351749 - 3352930 | 43519.7 |
| polyketide cyclase / dehydrase and lipid transport | PMI12_03201 | Not Available | Negative | 3352927 - 3353343 | 14751.6 |
| dna-binding domain-containing protein, arac-type | PMI12_03202 | Not Available | Negative | 3353357 - 3354235 | 31844.7 |
| aerobic-type carbon monoxide dehydrogenase, large subunit coxl/cutl-like protein | PMI12_03203 | Not Available | Negative | 3354271 - 3356604 | 82494.0 |
| leucyl/phenylalanyl-trna--protein transferase | PMI12_03204 | Not Available | Positive | 3356806 - 3357561 | 27781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
