Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase, alpha subunit | PMI12_03185 | Not Available | Positive | 3335369 - 3336328 | 33884.3 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | PMI12_03186 | Not Available | Positive | 3336377 - 3337153 | 27506.2 |
| ketopantoate reductase | PMI12_03187 | Not Available | Positive | 3337206 - 3338222 | 36105.8 |
| pyruvate kinase | PMI12_03188 | Not Available | Positive | 3338219 - 3339640 | 50542.1 |
| transcriptional regulator | PMI12_03189 | Not Available | Positive | 3339706 - 3340653 | 34815.4 |
| hypothetical protein | PMI12_03190 | Not Available | Negative | 3340696 - 3340857 | 5673.89 |
| nitrate/nitrite transporter | PMI12_03191 | Not Available | Positive | 3341495 - 3342829 | 47551.5 |
| nadh:ubiquinone oxidoreductase 24 kd subunit | PMI12_03192 | Not Available | Positive | 3343117 - 3343644 | 18775.4 |
| nadh:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit | PMI12_03193 | Not Available | Positive | 3343641 - 3345200 | 55114.5 |
| na+/h+ dicarboxylate symporter | PMI12_03194 | Not Available | Negative | 3345289 - 3346141 | 30380.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
