Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PMI12_03175 | Not Available | Positive | 3326116 - 3326805 | 24647.2 |
| type ii secretory pathway, component pulk | PMI12_03176 | Not Available | Positive | 3326802 - 3327791 | 34575.3 |
| type ii secretory pathway, component pull | PMI12_03177 | Not Available | Positive | 3327916 - 3329133 | 42896.0 |
| type ii secretory pathway, component pulm | PMI12_03178 | Not Available | Positive | 3329130 - 3329675 | 18995.8 |
| bacterial type ii secretion system protein n | PMI12_03179 | Not Available | Positive | 3329695 - 3330495 | 28213.0 |
| type ii secretory pathway, component puld | PMI12_03180 | Not Available | Positive | 3330501 - 3331544 | 36089.3 |
| pas domain s-box | PMI12_03181 | Not Available | Positive | 3331687 - 3332133 | 16470.7 |
| formyl-coa transferase | PMI12_03182 | Not Available | Positive | 3332130 - 3333377 | 45256.3 |
| hypothetical protein | PMI12_03183 | Not Available | Positive | 3333577 - 3333894 | 12462.5 |
| succinyl-coa synthetase, beta subunit | PMI12_03184 | Not Available | Positive | 3333930 - 3335102 | 42019.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
