Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein (porin) | PMI12_03165 | Not Available | Negative | 3317213 - 3318390 | 41193.2 |
| ubiquinone biosynthesis protein coq7 | PMI12_03166 | Not Available | Positive | 3318682 - 3319302 | 21961.1 |
| putative redox protein, regulator of disulfide bond formation | PMI12_03167 | Not Available | Negative | 3319312 - 3319761 | 15802.0 |
| outer membrane protein (porin) | PMI12_03168 | Not Available | Positive | 3320091 - 3321233 | 40559.0 |
| hypothetical protein | PMI12_03169 | Not Available | Negative | 3321327 - 3322298 | 36898.3 |
| threonine ammonia-lyase, biosynthetic, long form | PMI12_03170 | Not Available | Positive | 3322507 - 3324123 | 58364.9 |
| hypothetical protein | PMI12_03171 | Not Available | Negative | 3324129 - 3324758 | 20916.3 |
| general secretion pathway protein g | PMI12_03172 | Not Available | Positive | 3324773 - 3325249 | 17432.1 |
| general secretion pathway protein h | PMI12_03173 | Not Available | Positive | 3325224 - 3325736 | 17611.3 |
| general secretion pathway protein i | PMI12_03174 | Not Available | Positive | 3325733 - 3326116 | 13396.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
