Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamidase-like amidase | PMI12_03145 | Not Available | Positive | 3296577 - 3297191 | 21446.6 |
| succinate dehydrogenase/fumarate reductase flavoprotein subunit | PMI12_03146 | Not Available | Positive | 3297188 - 3298600 | 48293.6 |
| pep phosphonomutase-like enzyme | PMI12_03147 | Not Available | Positive | 3298597 - 3299460 | 31013.1 |
| transcriptional regulator | PMI12_03148 | Not Available | Negative | 3299470 - 3300357 | 32328.1 |
| short-chain alcohol dehydrogenase | PMI12_03149 | Not Available | Positive | 3300466 - 3301224 | 26266.5 |
| transcriptional regulator | PMI12_03150 | Not Available | Positive | 3301364 - 3302050 | 24519.4 |
| acyl-coa dehydrogenase | PMI12_03151 | Not Available | Positive | 3302125 - 3303921 | 64941.4 |
| hypothetical protein | PMI12_03152 | Not Available | Positive | 3303968 - 3304402 | 15650.7 |
| 3-hydroxyacyl-coa dehydrogenase | PMI12_03153 | Not Available | Positive | 3304443 - 3306842 | 85531.3 |
| hypothetical protein | PMI12_03154 | Not Available | Positive | 3306907 - 3307323 | 15465.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
