Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type uncharacterized transport system, atpase component | PMI12_03125 | Not Available | Positive | 3274856 - 3275923 | 39628.3 |
| hypothetical protein | PMI12_03126 | Not Available | Positive | 3276113 - 3277084 | 34559.0 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_03127 | Not Available | Positive | 3277235 - 3278110 | 31507.8 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_03128 | Not Available | Positive | 3278120 - 3279259 | 40938.9 |
| abc-type polar amino acid transport system, atpase component | PMI12_03129 | Not Available | Positive | 3279272 - 3280015 | 27413.3 |
| histidine utilization repressor | PMI12_03130 | Not Available | Positive | 3280017 - 3280817 | 29723.5 |
| histidine ammonia-lyase | PMI12_03131 | Not Available | Positive | 3280900 - 3282468 | 54212.6 |
| urocanate hydratase | PMI12_03132 | Not Available | Positive | 3282488 - 3283926 | 52811.0 |
| dna-binding domain-containing protein, arac-type | PMI12_03133 | Not Available | Positive | 3284110 - 3284637 | 19296.8 |
| transcriptional regulator | PMI12_03134 | Not Available | Positive | 3284691 - 3285473 | 28895.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
