Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease component of abc-type sugar transporter | PMI12_03115 | Not Available | Positive | 3267078 - 3267935 | 31801.1 |
| abc-type sugar transport system, permease component | PMI12_03116 | Not Available | Positive | 3267949 - 3268785 | 30510.9 |
| atpase component of abc-type sugar transporter | PMI12_03117 | Not Available | Positive | 3268803 - 3269296 | 18098.2 |
| hypothetical protein | PMI12_03118 | Not Available | Positive | 3269297 - 3270111 | 30176.8 |
| protein of unknown function (duf2384) | PMI12_03119 | Not Available | Positive | 3270108 - 3270323 | 7545.83 |
| hypothetical protein | PMI12_03120 | Not Available | Positive | 3270350 - 3270886 | 20351.9 |
| putative phosphoesterase, icc | PMI12_03121 | Not Available | Positive | 3270883 - 3271818 | 34494.9 |
| putative phosphohydrolase | PMI12_03122 | Not Available | Positive | 3271898 - 3272716 | 30726.4 |
| hypothetical protein | PMI12_03123 | Not Available | Negative | 3272728 - 3273201 | 18198.8 |
| transcriptional regulator | PMI12_03124 | Not Available | Negative | 3273412 - 3274053 | 23622.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
