Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type spermidine/putrescine transport system, atpase component | PMI12_03105 | Not Available | Positive | 3256752 - 3257801 | 37124.8 |
| haloacid dehalogenase superfamily protein, subfamily ia, variant 3 with third motif having dd or ed | PMI12_03106 | Not Available | Positive | 3257814 - 3258476 | 24440.5 |
| bacterial lipocalin | PMI12_03107 | Not Available | Negative | 3258422 - 3259093 | 24269.9 |
| transaldolase | PMI12_03108 | Not Available | Positive | 3259322 - 3260278 | 34513.3 |
| glucose-6-phosphate isomerase | PMI12_03109 | Not Available | Positive | 3260281 - 3261834 | 56386.9 |
| putative membrane protein | PMI12_03110 | Not Available | Positive | 3261978 - 3262310 | 12267.1 |
| pyridoxal phosphate biosynthesis protein | PMI12_03111 | Not Available | Negative | 3262342 - 3263394 | 37058.8 |
| hypothetical protein | PMI12_03112 | Not Available | Negative | 3263441 - 3264415 | 33753.8 |
| transcriptional regulator | PMI12_03113 | Not Available | Positive | 3264510 - 3265439 | 33535.8 |
| abc-type sugar transport system, periplasmic component | PMI12_03114 | Not Available | Positive | 3265619 - 3266929 | 47680.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
