Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_03095 | Not Available | Positive | 3243871 - 3244851 | 35998.5 |
| amidohydrolase | PMI12_03096 | Not Available | Positive | 3244856 - 3246127 | 44836.6 |
| abc-type dipeptide transport system, periplasmic component | PMI12_03097 | Not Available | Positive | 3246159 - 3247745 | 58205.9 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_03098 | Not Available | Positive | 3247817 - 3248728 | 32312.2 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_03099 | Not Available | Positive | 3248748 - 3249818 | 38198.3 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_03100 | Not Available | Positive | 3249815 - 3250822 | 37039.0 |
| hypothetical protein | PMI12_03101 | Not Available | Positive | 3250900 - 3251820 | 32743.9 |
| glucose-6-phosphate 1-dehydrogenase | PMI12_03102 | Not Available | Negative | 3251843 - 3253315 | 54997.6 |
| abc-type fe3+ transport system, periplasmic component | PMI12_03103 | Not Available | Positive | 3253447 - 3254481 | 37397.8 |
| abc-type fe3+ transport system, permease component | PMI12_03104 | Not Available | Positive | 3254494 - 3256755 | 79881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
