Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspa-like protein | PMI12_03075 | Not Available | Negative | 3223673 - 3224113 | 14983.2 |
| hypothetical protein | PMI12_03076 | Not Available | Negative | 3224231 - 3224989 | 27990.2 |
| hypothetical protein | PMI12_03077 | Not Available | Negative | 3224986 - 3225270 | 10681.3 |
| putative methyltransferase | PMI12_03078 | Not Available | Negative | 3225972 - 3226868 | 32584.9 |
| tigr03440 family protein | PMI12_03079 | Not Available | Negative | 3226982 - 3228235 | 46004.2 |
| nadh dehydrogenase, fad-containing subunit | PMI12_03080 | Not Available | Positive | 3228396 - 3229742 | 47568.3 |
| micrococcal nuclease-like nuclease | PMI12_03081 | Not Available | Negative | 3229789 - 3230307 | 19463.1 |
| sel1 repeat protein | PMI12_03082 | Not Available | Positive | 3230430 - 3230909 | 17632.7 |
| transglycosylase | PMI12_03083 | Not Available | Positive | 3231029 - 3234031 | 110931.0 |
| tripartite atp-independent periplasmic transporter solute receptor, dctp family | PMI12_03084 | Not Available | Negative | 3234069 - 3235112 | 38206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
