Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03045 | Not Available | Negative | 3202280 - 3202714 | 15152.1 |
| ribosome biogenesis gtp-binding protein ylqf | PMI12_03046 | Not Available | Negative | 3202881 - 3203849 | 35144.6 |
| smpa / omla family | PMI12_03047 | Not Available | Positive | 3204058 - 3204672 | 22393.1 |
| putative signal-transduction protein containing camp-binding and cbs domain containing protein | PMI12_03048 | Not Available | Positive | 3204818 - 3205246 | 16034.5 |
| sigma 54 modulation protein / s30ea ribosomal protein | PMI12_03049 | Not Available | Positive | 3205371 - 3205730 | 13364.6 |
| putative transcriptional regulator | PMI12_03050 | Not Available | Negative | 3205737 - 3206183 | 16887.6 |
| ketosteroid isomerase-like protein | PMI12_03051 | Not Available | Negative | 3206173 - 3206601 | 15817.7 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_03052 | Not Available | Negative | 3206704 - 3207630 | 31889.2 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_03053 | Not Available | Negative | 3207727 - 3208119 | 14527.3 |
| glutamate--cysteine ligase | PMI12_03054 | Not Available | Negative | 3208234 - 3209733 | 54974.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
