Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03035 | Not Available | Negative | 3192042 - 3192383 | 12131.3 |
| glutaminyl-trna synthetase | PMI12_03036 | Not Available | Positive | 3192533 - 3194347 | 67340.2 |
| hypothetical protein | PMI12_03037 | Not Available | Negative | 3194359 - 3194661 | 10198.3 |
| pseudouridine synthase family protein | PMI12_03038 | Not Available | Positive | 3194712 - 3195296 | 21628.2 |
| metalloendopeptidase-like membrane protein | PMI12_03039 | Not Available | Positive | 3195334 - 3196239 | 31966.7 |
| putative deacylase | PMI12_03040 | Not Available | Negative | 3196618 - 3197553 | 34115.8 |
| zn-dependent hydrolase, glyoxylase | PMI12_03041 | Not Available | Negative | 3197665 - 3198636 | 34633.8 |
| ammonia permease | PMI12_03042 | Not Available | Negative | 3198713 - 3199915 | 42065.6 |
| response regulator of the lytr/algr family | PMI12_03043 | Not Available | Negative | 3200067 - 3200972 | 34162.5 |
| putative acyltransferase | PMI12_03044 | Not Available | Positive | 3201130 - 3202350 | 45830.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
