Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | PMI12_03015 | Not Available | Positive | 3166457 - 3167053 | 21356.4 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_03016 | Not Available | Positive | 3167126 - 3167830 | 25346.5 |
| hemagglutinin-like protein | PMI12_03017 | Not Available | Negative | 3167862 - 3169838 | 59541.0 |
| signal transduction histidine kinase | PMI12_03018 | Not Available | Positive | 3169944 - 3171830 | 68491.2 |
| undecaprenyl-diphosphatase uppp | PMI12_03019 | Not Available | Negative | 3171844 - 3172668 | 29709.2 |
| hypothetical protein | PMI12_03020 | Not Available | Positive | 3172816 - 3173697 | 32243.2 |
| asp/glu/hydantoin racemase | PMI12_03021 | Not Available | Negative | 3173689 - 3174345 | 22892.5 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_03022 | Not Available | Negative | 3174360 - 3175274 | 33215.2 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | PMI12_03023 | Not Available | Negative | 3175328 - 3176671 | 47337.9 |
| transcriptional regulator | PMI12_03024 | Not Available | Positive | 3176864 - 3177730 | 31046.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
