Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase | PMI12_02985 | Not Available | Negative | 3134467 - 3135237 | 27383.8 |
| rna methyltransferase, trmh family, group 1 | PMI12_02986 | Not Available | Negative | 3135327 - 3136067 | 26960.6 |
| inositol monophosphatase/fructose-1,6-bisphosphatase family protein | PMI12_02987 | Not Available | Positive | 3136177 - 3137232 | 37473.4 |
| putative membrane protein | PMI12_02988 | Not Available | Positive | 3137235 - 3139487 | 80742.9 |
| small-conductance mechanosensitive channel | PMI12_02989 | Not Available | Positive | 3139487 - 3140566 | 39477.9 |
| transcriptional regulator | PMI12_02990 | Not Available | Negative | 3140649 - 3141173 | 19090.4 |
| hypothetical protein | PMI12_02991 | Not Available | Positive | 3141279 - 3142277 | 35630.1 |
| hypothetical protein | PMI12_02992 | Not Available | Positive | 3142317 - 3143309 | 35150.5 |
| arylsulfatase a family protein | PMI12_02993 | Not Available | Positive | 3143363 - 3144679 | 48530.6 |
| dna/rna tunnel of bacterial dna dependent rna polymerase | PMI12_02994 | Not Available | Negative | 3144986 - 3145381 | 14712.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
