Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | PMI12_02975 | Not Available | Negative | 3123930 - 3125294 | 48592.0 |
| outer membrane protein | PMI12_02976 | Not Available | Negative | 3125317 - 3126654 | 47022.7 |
| hypothetical protein | PMI12_02977 | Not Available | Negative | 3126749 - 3127123 | 13604.7 |
| heavy metal response regulator | PMI12_02978 | Not Available | Positive | 3127283 - 3127960 | 25733.4 |
| heavy metal sensor kinase | PMI12_02979 | Not Available | Positive | 3127957 - 3129285 | 48563.7 |
| kef-type k+ transport system, membrane component | PMI12_02980 | Not Available | Negative | 3129293 - 3130546 | 43180.8 |
| putative transcriptional regulator | PMI12_02981 | Not Available | Negative | 3130583 - 3130900 | 11791.1 |
| hypothetical protein | PMI12_02982 | Not Available | Positive | 3131031 - 3131603 | 21085.4 |
| copper/silver-translocating p-type atpase | PMI12_02983 | Not Available | Negative | 3131625 - 3133916 | 79613.8 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | PMI12_02984 | Not Available | Positive | 3133987 - 3134457 | 17459.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
