Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavoprotein, hi0933 family | PMI12_02965 | Not Available | Positive | 3113638 - 3114855 | 43314.7 |
| ribosomal protein s21 | PMI12_02966 | Not Available | Positive | 3114966 - 3115178 | 8506.61 |
| hypothetical protein | PMI12_02967 | Not Available | Positive | 3115288 - 3115737 | 15860.5 |
| ntp pyrophosphohydrolase | PMI12_02968 | Not Available | Positive | 3115737 - 3116207 | 17111.4 |
| putative permease | PMI12_02969 | Not Available | Negative | 3116214 - 3116969 | 25632.3 |
| transcriptional regulator | PMI12_02970 | Not Available | Positive | 3117071 - 3117976 | 33135.2 |
| putative zn-dependent protease-like protein | PMI12_02971 | Not Available | Negative | 3118004 - 3119374 | 48498.1 |
| hypothetical protein | PMI12_02972 | Not Available | Positive | 3119481 - 3120137 | 24285.8 |
| molybdenum cofactor synthesis domain containing protein | PMI12_02973 | Not Available | Positive | 3120181 - 3120765 | 20767.2 |
| heavy metal efflux pump, cobalt-zinc-cadmium | PMI12_02974 | Not Available | Negative | 3120755 - 3123919 | 114014.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
