Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent nitrite reductase, small subunit | PMI12_02955 | Not Available | Positive | 3102238 - 3102633 | 13784.6 |
| putative anaerobic dehydrogenase | PMI12_02956 | Not Available | Positive | 3102709 - 3105504 | 100175.0 |
| anthranilate phosphoribosyltransferase | PMI12_02957 | Not Available | Positive | 3105605 - 3106510 | 32053.0 |
| uroporphyrin-iii c-methyltransferase | PMI12_02958 | Not Available | Positive | 3106507 - 3107310 | 27496.2 |
| abc-type spermidine/putrescine transport system, atpase component | PMI12_02959 | Not Available | Positive | 3107397 - 3108512 | 39366.5 |
| hypothetical protein | PMI12_02960 | Not Available | Positive | 3108583 - 3109851 | 45961.3 |
| abc-type spermidine/putrescine transport system, permease component i | PMI12_02961 | Not Available | Positive | 3109841 - 3110773 | 34399.1 |
| abc-type spermidine/putrescine transport system, permease component ii | PMI12_02962 | Not Available | Positive | 3110775 - 3111665 | 31524.3 |
| sterol desaturase | PMI12_02963 | Not Available | Positive | 3111729 - 3112853 | 42749.5 |
| putative distant relative of cell wall-associated hydrolase | PMI12_02964 | Not Available | Positive | 3112853 - 3113641 | 27781.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
