Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein involved in colicin e2 resistance | PMI12_02945 | Not Available | Negative | 3087957 - 3089429 | 52653.2 |
| von willebrand factor type a (vwa) domain protein containing protein | PMI12_02946 | Not Available | Positive | 3089635 - 3091707 | 75174.8 |
| exosortase/archaeosortase family protein | PMI12_02947 | Not Available | Positive | 3091727 - 3092656 | 32730.0 |
| hypothetical protein | PMI12_02948 | Not Available | Positive | 3092637 - 3093206 | 21322.5 |
| transglycosylase | PMI12_02949 | Not Available | Positive | 3093166 - 3094324 | 42048.8 |
| response regulator with putative antiterminator output domain | PMI12_02950 | Not Available | Negative | 3094393 - 3095745 | 48065.0 |
| nitrate/nitrite transporter | PMI12_02951 | Not Available | Positive | 3095934 - 3097202 | 44503.5 |
| serine/threonine protein phosphatase | PMI12_02952 | Not Available | Negative | 3097223 - 3098935 | 61665.4 |
| nad(p)h-dependent nitrite reductase, large subunit | PMI12_02953 | Not Available | Positive | 3098999 - 3101431 | 89348.5 |
| hypothetical protein | PMI12_02954 | Not Available | Positive | 3101428 - 3102219 | 28278.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
