Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase, ribosomal protein n-acetylase | PMI12_02935 | Not Available | Positive | 3077179 - 3077661 | 18336.2 |
| copper/silver-translocating p-type atpase | PMI12_02936 | Not Available | Negative | 3077672 - 3079882 | 76333.2 |
| copper chaperone | PMI12_02937 | Not Available | Positive | 3080040 - 3080234 | 6801.99 |
| cu(i)-responsive transcriptional regulator | PMI12_02938 | Not Available | Positive | 3080231 - 3080635 | 14976.0 |
| gtpase associated protein | PMI12_02939 | Not Available | Negative | 3080709 - 3081647 | 32761.5 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_02940 | Not Available | Positive | 3082214 - 3083008 | 29192.0 |
| signal transduction histidine kinase | PMI12_02941 | Not Available | Positive | 3083005 - 3084444 | 53723.8 |
| hypothetical protein | PMI12_02942 | Not Available | Negative | 3084438 - 3085055 | 23070.1 |
| penicillin-binding protein, 1a family | PMI12_02943 | Not Available | Negative | 3085141 - 3087546 | 87512.4 |
| hypothetical protein | PMI12_02944 | Not Available | Negative | 3087556 - 3087891 | 12191.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
