Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf1446) | PMI12_02925 | Not Available | Positive | 3066844 - 3068658 | 63105.7 |
| nadh:flavin oxidoreductase | PMI12_02926 | Not Available | Positive | 3068744 - 3069847 | 39125.3 |
| putative translation initiation inhibitor, yjgf family | PMI12_02927 | Not Available | Positive | 3069928 - 3070413 | 16707.6 |
| hypothetical protein | PMI12_02928 | Not Available | Positive | 3070498 - 3071247 | 27964.2 |
| signal transduction histidine kinase | PMI12_02929 | Not Available | Negative | 3071260 - 3072654 | 50639.0 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_02930 | Not Available | Negative | 3072662 - 3073351 | 25039.1 |
| esterase/lipase | PMI12_02931 | Not Available | Positive | 3073490 - 3074350 | 31916.4 |
| acyl carrier protein | PMI12_02932 | Not Available | Positive | 3074385 - 3074675 | 10220.0 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | PMI12_02933 | Not Available | Positive | 3074672 - 3075955 | 43341.4 |
| sterol desaturase | PMI12_02934 | Not Available | Positive | 3075991 - 3077121 | 42719.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
