Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02905 | Not Available | Negative | 3047946 - 3048491 | 19764.9 |
| hypothetical protein | PMI12_02906 | Not Available | Positive | 3048590 - 3049009 | 15569.8 |
| nad-dependent aldehyde dehydrogenase | PMI12_02907 | Not Available | Positive | 3049132 - 3050670 | 54002.5 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02908 | Not Available | Positive | 3050800 - 3051696 | 32097.9 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_02909 | Not Available | Positive | 3051693 - 3052913 | 43475.0 |
| thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase | PMI12_02910 | Not Available | Positive | 3053071 - 3054744 | 59908.0 |
| hypothetical protein | PMI12_02911 | Not Available | Negative | 3054767 - 3055066 | 11090.3 |
| putative permease | PMI12_02912 | Not Available | Positive | 3055511 - 3056269 | 26441.9 |
| chromate transporter, chromate ion transporter family | PMI12_02913 | Not Available | Positive | 3056290 - 3057654 | 48075.6 |
| hypothetical protein | PMI12_02914 | Not Available | Negative | 3057761 - 3058701 | 33748.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
