Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent hydrolase, glyoxylase | PMI12_02885 | Not Available | Negative | 3028270 - 3029229 | 35249.8 |
| transcriptional regulator | PMI12_02886 | Not Available | Positive | 3029373 - 3030218 | 29736.6 |
| hypothetical protein | PMI12_02887 | Not Available | Negative | 3030223 - 3030444 | 7440.43 |
| abc-type uncharacterized transport system, auxiliary component | PMI12_02888 | Not Available | Negative | 3030475 - 3031155 | 23710.3 |
| abc-type transport system involved in resistance to organic solvents, periplasmic component | PMI12_02889 | Not Available | Negative | 3031176 - 3032135 | 33525.7 |
| abc-type transport system involved in resistance to organic solvents, atpase component | PMI12_02890 | Not Available | Negative | 3032150 - 3032989 | 30025.4 |
| putative integral membrane protein | PMI12_02891 | Not Available | Negative | 3033002 - 3034168 | 41654.1 |
| transcriptional regulator | PMI12_02892 | Not Available | Negative | 3034338 - 3035285 | 34268.3 |
| methylmalonic acid semialdehyde dehydrogenase | PMI12_02893 | Not Available | Positive | 3035404 - 3036912 | 53655.7 |
| choline dehydrogenase-like flavoprotein | PMI12_02894 | Not Available | Positive | 3037079 - 3038707 | 59546.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
