Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna(gln) and/or aspartyl-trna(asn) amidotransferase, c subunit | PMI12_02875 | Not Available | Negative | 3017254 - 3017553 | 10746.8 |
| cell shape determining protein, mreb/mrl family | PMI12_02876 | Not Available | Positive | 3017769 - 3018812 | 36863.0 |
| rod shape-determining protein mrec | PMI12_02877 | Not Available | Positive | 3018899 - 3019858 | 34132.3 |
| rod shape-determining protein mred | PMI12_02878 | Not Available | Positive | 3019855 - 3020376 | 19023.0 |
| penicillin-binding protein 2 | PMI12_02879 | Not Available | Positive | 3020553 - 3022523 | 71499.5 |
| fumarylacetoacetase | PMI12_02880 | Not Available | Negative | 3022650 - 3023915 | 45350.7 |
| hypothetical protein | PMI12_02881 | Not Available | Negative | 3023953 - 3024930 | 33574.7 |
| homogentisate 1,2-dioxygenase | PMI12_02882 | Not Available | Negative | 3024927 - 3026240 | 48412.4 |
| protein of unknown function (duf2783) | PMI12_02883 | Not Available | Negative | 3026288 - 3026485 | 7055.26 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase | PMI12_02884 | Not Available | Negative | 3026494 - 3028131 | 60062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
