Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad/fmn-dependent dehydrogenase | PMI12_02865 | Not Available | Negative | 3005219 - 3006721 | 53407.5 |
| transcriptional regulator | PMI12_02866 | Not Available | Negative | 3006863 - 3007747 | 32336.8 |
| gluconolactonase | PMI12_02867 | Not Available | Negative | 3007870 - 3008802 | 34009.9 |
| ammonium transporter | PMI12_02868 | Not Available | Negative | 3009016 - 3010440 | 47706.4 |
| nitrogen regulatory protein pii | PMI12_02869 | Not Available | Negative | 3010470 - 3010808 | 12259.9 |
| hypothetical protein | PMI12_02870 | Not Available | Negative | 3010873 - 3010983 | 3872.69 |
| hypothetical protein | PMI12_02871 | Not Available | Positive | 3010984 - 3013161 | 74628.6 |
| hypothetical protein | PMI12_02872 | Not Available | Positive | 3013896 - 3014242 | 12706.6 |
| glutamyl-trna(gln) and/or aspartyl-trna(asn) amidotransferase, b subunit | PMI12_02873 | Not Available | Negative | 3014272 - 3015762 | 54149.5 |
| glutamyl-trna(gln) and/or aspartyl-trna(asn) amidotransferase, a subunit | PMI12_02874 | Not Available | Negative | 3015764 - 3017254 | 52366.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
