Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_02835 | Not Available | Positive | 2965996 - 2966463 | 17541.6 |
| pyridoxal phosphate enzyme, yggs family | PMI12_02836 | Not Available | Negative | 2966476 - 2967180 | 24884.0 |
| pilus retraction protein pilt | PMI12_02837 | Not Available | Positive | 2967232 - 2968275 | 38137.1 |
| pilus retraction protein pilt | PMI12_02838 | Not Available | Positive | 2968412 - 2969548 | 41880.4 |
| beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase | PMI12_02839 | Not Available | Positive | 2969668 - 2970618 | 32866.6 |
| serine/threonine protein kinase | PMI12_02840 | Not Available | Positive | 2970789 - 2972684 | 66324.1 |
| membrane-bound lytic murein transglycosylase | PMI12_02841 | Not Available | Positive | 2972740 - 2974338 | 55793.9 |
| hypothetical protein | PMI12_02842 | Not Available | Positive | 2974505 - 2975254 | 27180.5 |
| hypothetical protein | PMI12_02843 | Not Available | Positive | 2975282 - 2976445 | 40916.5 |
| caspase domain-containing protein | PMI12_02844 | Not Available | Positive | 2976571 - 2978715 | 76405.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
