Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l21 | PMI12_02805 | Not Available | Positive | 2938726 - 2939037 | 11276.8 |
| ribosomal protein l27 | PMI12_02806 | Not Available | Positive | 2939050 - 2939310 | 8903.78 |
| obg family gtpase cgta | PMI12_02807 | Not Available | Positive | 2939382 - 2940458 | 38829.8 |
| glutamate 5-kinase | PMI12_02808 | Not Available | Positive | 2940564 - 2941676 | 39551.7 |
| cnp1-like family | PMI12_02809 | Not Available | Negative | 2941718 - 2942311 | 21987.2 |
| ntp pyrophosphohydrolase | PMI12_02810 | Not Available | Negative | 2942259 - 2942927 | 26316.0 |
| prolyl-trna synthetase, family ii | PMI12_02811 | Not Available | Positive | 2943075 - 2944820 | 64077.3 |
| soluble lytic murein transglycosylase-like protein | PMI12_02812 | Not Available | Positive | 2944817 - 2945494 | 25024.1 |
| cbs domain-containing protein | PMI12_02813 | Not Available | Negative | 2945502 - 2946812 | 48404.0 |
| putative mannose-6-phosphate isomerase | PMI12_02814 | Not Available | Negative | 2946868 - 2947374 | 18233.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
