Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02795 | Not Available | Negative | 2928972 - 2929184 | 7665.99 |
| hypothetical protein | PMI12_02796 | Not Available | Negative | 2929181 - 2929936 | 28382.1 |
| hypothetical protein | PMI12_02797 | Not Available | Negative | 2929967 - 2931001 | 38760.4 |
| putative membrane protein involved in d-alanine export | PMI12_02798 | Not Available | Negative | 2931163 - 2932656 | 55964.2 |
| dephospho-coa kinase | PMI12_02799 | Not Available | Negative | 2932726 - 2933334 | 21145.7 |
| prepilin signal peptidase pulo-like peptidase | PMI12_02800 | Not Available | Negative | 2933343 - 2934308 | 34449.7 |
| type ii secretory pathway, component pulf | PMI12_02801 | Not Available | Negative | 2934308 - 2935537 | 44650.9 |
| type iv-a pilus assembly atpase pilb | PMI12_02802 | Not Available | Negative | 2935566 - 2937299 | 62819.7 |
| Trna-pro | Not Available | Not Available | Positive | 2937413 - 2937489 | Not Available |
| geranylgeranyl pyrophosphate synthase | PMI12_02804 | Not Available | Negative | 2937543 - 2938535 | 35025.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
