Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02785 | Not Available | Negative | 2916140 - 2916808 | 24539.2 |
| threonine synthase | PMI12_02786 | Not Available | Positive | 2916861 - 2918012 | 41458.7 |
| putative ornithine cyclodeaminase, mu-crystallin | PMI12_02787 | Not Available | Negative | 2918019 - 2919005 | 35215.1 |
| protein of unknown function (duf721) | PMI12_02788 | Not Available | Negative | 2919063 - 2919371 | 10957.5 |
| preprotein translocase, seca subunit | PMI12_02789 | Not Available | Positive | 2919553 - 2922339 | 104626.0 |
| glutamate n-acetyltransferase/amino-acid acetyltransferase | PMI12_02790 | Not Available | Positive | 2922370 - 2923599 | 43019.4 |
| putative atpase (aaa+ superfamily) | PMI12_02791 | Not Available | Positive | 2923622 - 2924557 | 34607.1 |
| adp-ribose pyrophosphatase | PMI12_02792 | Not Available | Positive | 2924554 - 2925000 | 16540.8 |
| putative acyltransferase | PMI12_02793 | Not Available | Positive | 2925004 - 2926971 | 71956.7 |
| putative acyltransferase | PMI12_02794 | Not Available | Positive | 2926989 - 2928959 | 71273.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
