Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative addiction module antidote | PMI12_02775 | Not Available | Positive | 2905580 - 2905807 | 8294.2 |
| death-on-curing family protein | PMI12_02776 | Not Available | Positive | 2905804 - 2906208 | 14637.2 |
| urease, alpha subunit | PMI12_02777 | Not Available | Negative | 2906212 - 2907930 | 61051.1 |
| urease, beta subunit | PMI12_02778 | Not Available | Negative | 2907933 - 2908238 | 11022.2 |
| hydrogenase/urease accessory protein | PMI12_02779 | Not Available | Negative | 2908241 - 2908846 | 20264.3 |
| urease, gamma subunit | PMI12_02780 | Not Available | Negative | 2908875 - 2909177 | 10847.3 |
| signal transduction histidine kinase | PMI12_02781 | Not Available | Positive | 2909282 - 2912896 | 130535.0 |
| response regulator containing a chey-like receiver domain and a ggdef domain | PMI12_02782 | Not Available | Positive | 2912893 - 2913924 | 37485.0 |
| hypothetical protein | PMI12_02783 | Not Available | Positive | 2914067 - 2914735 | 23441.7 |
| threonine synthase | PMI12_02784 | Not Available | Positive | 2914860 - 2916104 | 43419.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
