Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | PMI12_02765 | Not Available | Positive | 2899312 - 2900496 | 41692.8 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_02766 | Not Available | Positive | 2900522 - 2901280 | 25775.3 |
| acetyl-coa acetyltransferase | PMI12_02767 | Not Available | Positive | 2901309 - 2901704 | 13155.1 |
| hypothetical protein | PMI12_02768 | Not Available | Positive | 2901705 - 2901939 | 7848.66 |
| hypothetical protein | PMI12_02769 | Not Available | Positive | 2901939 - 2902562 | 21723.5 |
| hypothetical protein | PMI12_02770 | Not Available | Positive | 2902768 - 2903178 | 14711.2 |
| protein of unknown function (duf3606) | PMI12_02771 | Not Available | Positive | 2903289 - 2903468 | 6780.93 |
| urease accessory protein ureg | PMI12_02772 | Not Available | Negative | 2903490 - 2904140 | 23524.5 |
| urease accessory protein uref | PMI12_02773 | Not Available | Negative | 2904157 - 2904837 | 24562.2 |
| urease accessory protein uree | PMI12_02774 | Not Available | Negative | 2904936 - 2905508 | 20580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
