Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02755 | Not Available | Negative | 2886336 - 2887073 | 26601.8 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02756 | Not Available | Negative | 2887075 - 2888886 | 64779.3 |
| hypothetical protein | PMI12_02757 | Not Available | Positive | 2889384 - 2891639 | 78657.0 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_02758 | Not Available | Negative | 2892326 - 2893009 | 24890.4 |
| pas domain s-box | PMI12_02759 | Not Available | Negative | 2892972 - 2894015 | 39264.3 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02760 | Not Available | Positive | 2894141 - 2895379 | 44704.1 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_02761 | Not Available | Positive | 2895478 - 2896425 | 33894.9 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_02762 | Not Available | Positive | 2896428 - 2897768 | 48178.9 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02763 | Not Available | Positive | 2897765 - 2898553 | 28303.2 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02764 | Not Available | Positive | 2898555 - 2899250 | 25525.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
