Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02715 | Not Available | Positive | 2852607 - 2852873 | 9872.61 |
| hypothetical protein | PMI12_02716 | Not Available | Negative | 2852904 - 2853122 | 7902.42 |
| alkylated dna repair protein | PMI12_02717 | Not Available | Negative | 2853245 - 2853928 | 24385.4 |
| hypothetical protein | PMI12_02718 | Not Available | Positive | 2854151 - 2854321 | 6224.45 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | PMI12_02719 | Not Available | Positive | 2854415 - 2856043 | 60065.1 |
| membrane-bound metallopeptidase | PMI12_02720 | Not Available | Negative | 2856132 - 2856638 | 17963.8 |
| hypothetical protein | PMI12_02721 | Not Available | Negative | 2856794 - 2857276 | 17213.0 |
| adp-ribose pyrophosphatase | PMI12_02722 | Not Available | Negative | 2857291 - 2857842 | 21057.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | PMI12_02723 | Not Available | Negative | 2857860 - 2858561 | 24984.0 |
| maleylacetoacetate isomerase | PMI12_02724 | Not Available | Positive | 2858702 - 2859340 | 24006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
