Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tim-barrel fold metal-dependent hydrolase | PMI12_02695 | Not Available | Negative | 2830195 - 2831070 | 32180.1 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_02696 | Not Available | Negative | 2831075 - 2832268 | 42879.2 |
| hypothetical protein | PMI12_02697 | Not Available | Negative | 2832295 - 2833269 | 33552.7 |
| citrate lyase beta subunit | PMI12_02698 | Not Available | Negative | 2833305 - 2834174 | 30784.1 |
| transcriptional regulator | PMI12_02699 | Not Available | Positive | 2834250 - 2835155 | 32479.8 |
| hypothetical protein | PMI12_02700 | Not Available | Negative | 2835152 - 2835778 | 20885.0 |
| hypothetical protein | PMI12_02701 | Not Available | Negative | 2835813 - 2836613 | 30272.7 |
| hypothetical protein | PMI12_02702 | Not Available | Negative | 2836615 - 2837295 | 24343.2 |
| hypothetical protein | PMI12_02703 | Not Available | Negative | 2837339 - 2838559 | 42699.9 |
| methylase involved in ubiquinone/menaquinone biosynthesis | PMI12_02704 | Not Available | Positive | 2838737 - 2839549 | 29336.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
