Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02685 | Not Available | Negative | 2818078 - 2819307 | 43621.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_02686 | Not Available | Negative | 2819401 - 2821056 | 60299.3 |
| amidohydrolase | PMI12_02687 | Not Available | Negative | 2821213 - 2822550 | 46342.9 |
| hypothetical protein | PMI12_02688 | Not Available | Positive | 2823405 - 2823650 | 9084.15 |
| cytochrome c biogenesis protein | PMI12_02689 | Not Available | Negative | 2823877 - 2825610 | 60872.9 |
| signal transduction histidine kinase | PMI12_02690 | Not Available | Negative | 2825760 - 2827085 | 48626.0 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_02691 | Not Available | Positive | 2827405 - 2828148 | 27865.8 |
| hypothetical protein | PMI12_02692 | Not Available | Negative | 2828112 - 2828270 | 5915.11 |
| thiol-disulfide isomerase-like thioredoxin | PMI12_02693 | Not Available | Negative | 2828493 - 2829056 | 20656.7 |
| hypothetical protein | PMI12_02694 | Not Available | Negative | 2829209 - 2830171 | 33127.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
