Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein (porin) | PMI12_02675 | Not Available | Positive | 2808356 - 2809564 | 41395.8 |
| transcriptional regulator | PMI12_02676 | Not Available | Positive | 2809637 - 2810392 | 27968.2 |
| putative flavoprotein involved in k+ transport | PMI12_02677 | Not Available | Positive | 2810523 - 2812196 | 62145.0 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_02678 | Not Available | Negative | 2812235 - 2813026 | 26974.3 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_02679 | Not Available | Negative | 2813038 - 2813994 | 34416.3 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_02680 | Not Available | Negative | 2814006 - 2814887 | 31217.7 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02681 | Not Available | Negative | 2814919 - 2815647 | 26606.5 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02682 | Not Available | Negative | 2815640 - 2816389 | 27316.2 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_02683 | Not Available | Negative | 2816410 - 2817162 | 25975.4 |
| gluconolactonase | PMI12_02684 | Not Available | Negative | 2817176 - 2818063 | 31721.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
