Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | PMI12_02645 | Not Available | Positive | 2766606 - 2768648 | 77481.6 |
| trehalose synthase | PMI12_02646 | Not Available | Positive | 2768664 - 2771966 | 124313.0 |
| hypothetical protein | PMI12_02647 | Not Available | Positive | 2772000 - 2772749 | 27114.5 |
| glycogen debranching enzyme glgx | PMI12_02648 | Not Available | Positive | 2772750 - 2774912 | 80670.7 |
| malto-oligosyltrehalose trehalohydrolase | PMI12_02649 | Not Available | Positive | 2774929 - 2776791 | 67982.9 |
| 4-alpha-glucanotransferase/malto- oligosyltrehalose synthase | PMI12_02650 | Not Available | Positive | 2776781 - 2781919 | 187432.0 |
| duf2204 family protein | PMI12_02651 | Not Available | Negative | 2781941 - 2782789 | 32146.2 |
| putative phosphoesterase, icc | PMI12_02652 | Not Available | Positive | 2782943 - 2783722 | 27524.0 |
| pas domain s-box | PMI12_02653 | Not Available | Positive | 2783791 - 2785719 | 70685.4 |
| hypothetical protein | PMI12_02654 | Not Available | Negative | 2786058 - 2786210 | 6103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
