Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02635 | Not Available | Negative | 2755366 - 2755617 | 8859.45 |
| fe-s-cluster-containing hydrogenase subunit | PMI12_02636 | Not Available | Negative | 2755614 - 2756234 | 21960.1 |
| anaerobic dehydrogenase, typically selenocysteine-containing | PMI12_02637 | Not Available | Negative | 2756244 - 2759231 | 109954.0 |
| hypothetical protein | PMI12_02638 | Not Available | Negative | 2759244 - 2759465 | 7369.72 |
| putative component of anaerobic dehydrogenase | PMI12_02639 | Not Available | Negative | 2759579 - 2760196 | 22395.5 |
| nadh:ubiquinone oxidoreductase chain i-like protein | PMI12_02640 | Not Available | Negative | 2760193 - 2762271 | 73447.5 |
| protein of unknown function (duf3306) | PMI12_02641 | Not Available | Negative | 2762231 - 2762854 | 22318.7 |
| protein of unknown function (duf3305) | PMI12_02642 | Not Available | Negative | 2762847 - 2763431 | 22152.0 |
| hypothetical protein required for formate dehydrogenase activity | PMI12_02643 | Not Available | Positive | 2763539 - 2764450 | 33008.8 |
| alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | PMI12_02644 | Not Available | Positive | 2764717 - 2766609 | 71172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
