Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02625 | Not Available | Positive | 2742692 - 2743690 | 34716.1 |
| enoyl-coa hydratase/carnithine racemase | PMI12_02626 | Not Available | Positive | 2743708 - 2744508 | 28498.1 |
| acyl-coa synthetase (ndp forming) | PMI12_02627 | Not Available | Positive | 2744514 - 2746598 | 71705.8 |
| hypothetical protein involved in propionate catabolism | PMI12_02628 | Not Available | Positive | 2746631 - 2747965 | 47439.5 |
| abc-type polar amino acid transport system, atpase component | PMI12_02629 | Not Available | Negative | 2748037 - 2749539 | 53026.6 |
| abc-type tungstate transport system, permease component | PMI12_02630 | Not Available | Negative | 2749611 - 2750447 | 29569.5 |
| molybdenum cofactor synthesis domain containing protein | PMI12_02631 | Not Available | Negative | 2750490 - 2752409 | 66992.5 |
| molybdopterin biosynthesis enzyme | PMI12_02632 | Not Available | Negative | 2752406 - 2753620 | 42197.5 |
| hypothetical protein | PMI12_02633 | Not Available | Negative | 2753699 - 2754097 | 13225.5 |
| formate dehydrogenase, gamma subunit | PMI12_02634 | Not Available | Negative | 2754094 - 2755353 | 45181.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
