Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| msmeg_0570 family protein | PMI12_02615 | Not Available | Positive | 2734376 - 2734660 | 10482.4 |
| flavin-dependent oxidoreductase, msmeg_0569 family | PMI12_02616 | Not Available | Positive | 2734693 - 2735991 | 47630.2 |
| hypothetical protein | PMI12_02617 | Not Available | Negative | 2736016 - 2736543 | 19626.3 |
| hypothetical protein | PMI12_02618 | Not Available | Negative | 2736557 - 2737084 | 19120.4 |
| hypothetical protein | PMI12_02619 | Not Available | Negative | 2737081 - 2738040 | 33568.8 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_02620 | Not Available | Negative | 2738078 - 2738878 | 27607.2 |
| putative tim-barrel fold metal-dependent hydrolase | PMI12_02621 | Not Available | Negative | 2738875 - 2739384 | 18776.6 |
| transcriptional regulator | PMI12_02622 | Not Available | Positive | 2739785 - 2740669 | 31707.4 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_02623 | Not Available | Positive | 2741059 - 2741661 | 21472.5 |
| transcriptional regulator | PMI12_02624 | Not Available | Negative | 2741695 - 2742117 | 15380.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
