Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_02605 | Not Available | Positive | 2723859 - 2724980 | 40025.2 |
| nad(p)h-nitrite reductase | PMI12_02606 | Not Available | Negative | 2725119 - 2725385 | 9296.29 |
| glycine/d-amino acid oxidase, deaminating | PMI12_02607 | Not Available | Negative | 2725463 - 2726788 | 47312.4 |
| nad-dependent aldehyde dehydrogenase | PMI12_02608 | Not Available | Negative | 2726809 - 2728290 | 52241.7 |
| transcriptional regulator with hth domain and aminotransferase domain containing protein | PMI12_02609 | Not Available | Negative | 2728486 - 2729886 | 50423.5 |
| msmeg_0572 family protein | PMI12_02610 | Not Available | Positive | 2730238 - 2730720 | 17696.4 |
| putative nitrilase, sll0784 family | PMI12_02611 | Not Available | Positive | 2730736 - 2731782 | 37869.4 |
| radical sam protein, msmeg_0568 family | PMI12_02612 | Not Available | Positive | 2731745 - 2732815 | 37828.6 |
| putative n-acetyltransferase | PMI12_02613 | Not Available | Positive | 2732818 - 2733378 | 20971.3 |
| air synthase-related protein, sll0787 family | PMI12_02614 | Not Available | Positive | 2733375 - 2734385 | 35228.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
