Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_02595 | Not Available | Positive | 2713667 - 2714653 | 34219.8 |
| guanine deaminase | PMI12_02596 | Not Available | Positive | 2714730 - 2716016 | 46731.2 |
| type iv secretory pathway, vird2 component (relaxase) | PMI12_02597 | Not Available | Positive | 2716153 - 2717357 | 44172.3 |
| transcriptional regulator | PMI12_02598 | Not Available | Negative | 2717565 - 2718218 | 22733.8 |
| short-chain dehydrogenase of unknown substrate specificity | PMI12_02599 | Not Available | Positive | 2718312 - 2719100 | 27774.5 |
| putative quinone oxidoreductase, yhdh/yhfp family | PMI12_02600 | Not Available | Positive | 2719135 - 2720121 | 34034.0 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_02601 | Not Available | Positive | 2720178 - 2720699 | 18270.0 |
| zn-dependent oxidoreductase, nadph:quinone reductase | PMI12_02602 | Not Available | Positive | 2720758 - 2721759 | 36067.2 |
| hypothetical protein | PMI12_02603 | Not Available | Negative | 2721708 - 2721830 | 4356.37 |
| cytochrome p450 | PMI12_02604 | Not Available | Positive | 2722280 - 2723758 | 55152.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
