Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type polar amino acid transport system, atpase component | PMI12_02585 | Not Available | Negative | 2703933 - 2704694 | 27523.5 |
| ectoine/hydroxyectoine abc transporter, permease protein ehud | PMI12_02586 | Not Available | Negative | 2704691 - 2705362 | 24330.6 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02587 | Not Available | Negative | 2705529 - 2706296 | 27069.1 |
| transcriptional regulator | PMI12_02588 | Not Available | Positive | 2706474 - 2707298 | 30189.4 |
| adenosine deaminase | PMI12_02589 | Not Available | Positive | 2707343 - 2708446 | 40717.6 |
| sugar phosphate permease | PMI12_02590 | Not Available | Negative | 2708407 - 2709714 | 45057.9 |
| transcriptional regulator | PMI12_02591 | Not Available | Positive | 2709811 - 2710752 | 34076.2 |
| putative abc-type transport system, periplasmic component/surface lipoprotein | PMI12_02592 | Not Available | Positive | 2710854 - 2711957 | 39885.8 |
| transcriptional regulator | PMI12_02593 | Not Available | Negative | 2712080 - 2712961 | 31607.5 |
| short-chain alcohol dehydrogenase | PMI12_02594 | Not Available | Positive | 2713065 - 2713670 | 21025.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
