Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | PMI12_02575 | Not Available | Negative | 2690775 - 2691545 | 27068.0 |
| tomm system kinase/cyclase multidomain protein | PMI12_02576 | Not Available | Positive | 2691972 - 2696000 | 146176.0 |
| ribosomal natural product, bma_0021 family | PMI12_02577 | Not Available | Positive | 2696019 - 2696813 | 29238.6 |
| o-methyltransferase involved in polyketide biosynthesis | PMI12_02578 | Not Available | Positive | 2696965 - 2697663 | 24894.2 |
| bacteriocin biosynthesis cyclodehydratase domain containing protein | PMI12_02579 | Not Available | Positive | 2697620 - 2699794 | 78200.0 |
| fha domain-containing protein | PMI12_02580 | Not Available | Positive | 2699817 - 2700755 | 34277.7 |
| hypothetical protein | PMI12_02581 | Not Available | Positive | 2700860 - 2701516 | 23820.6 |
| hypothetical protein | PMI12_02582 | Not Available | Positive | 2701649 - 2702020 | 14010.0 |
| hypothetical protein | PMI12_02583 | Not Available | Negative | 2702172 - 2702564 | 14885.0 |
| glycine/d-amino acid oxidase, deaminating | PMI12_02584 | Not Available | Negative | 2702653 - 2703936 | 44897.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
