Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain alcohol dehydrogenase | PMI12_02565 | Not Available | Positive | 2679751 - 2680656 | 32011.4 |
| hypothetical protein | PMI12_02566 | Not Available | Positive | 2680946 - 2681191 | 8625.98 |
| hypothetical protein | PMI12_02567 | Not Available | Positive | 2681267 - 2681482 | 7590.48 |
| hypothetical protein | PMI12_02568 | Not Available | Negative | 2681486 - 2682205 | 26200.9 |
| penicillin-binding protein, beta-lactamase class c | PMI12_02569 | Not Available | Negative | 2682202 - 2683779 | 56519.5 |
| transcriptional regulator | PMI12_02570 | Not Available | Negative | 2683860 - 2684801 | 34027.1 |
| acyl carrier protein phosphodiesterase | PMI12_02571 | Not Available | Positive | 2684910 - 2685638 | 26659.5 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI12_02572 | Not Available | Positive | 2685778 - 2688555 | 101352.0 |
| arabinose efflux permease family protein | PMI12_02573 | Not Available | Negative | 2688582 - 2689772 | 40334.7 |
| transcriptional regulator | PMI12_02574 | Not Available | Positive | 2689864 - 2690826 | 34883.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
