Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | PMI12_02555 | Not Available | Positive | 2670432 - 2672285 | 67131.1 |
| hypothetical protein | PMI12_02556 | Not Available | Positive | 2672285 - 2672551 | 9365.43 |
| stress responsive a/b barrel domain-containing protein | PMI12_02557 | Not Available | Positive | 2672563 - 2672865 | 11037.4 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_02558 | Not Available | Positive | 2673001 - 2673798 | 28050.8 |
| hypothetical protein | PMI12_02559 | Not Available | Positive | 2673800 - 2674267 | 16874.0 |
| putative nadp-dependent oxidoreductase | PMI12_02560 | Not Available | Positive | 2674296 - 2675312 | 35951.6 |
| acyl-coa dehydrogenase | PMI12_02561 | Not Available | Positive | 2675419 - 2677059 | 58771.6 |
| glutathione s-transferase | PMI12_02562 | Not Available | Positive | 2677090 - 2678028 | 34525.5 |
| hypothetical protein | PMI12_02563 | Not Available | Negative | 2678059 - 2678523 | 17102.5 |
| hypothetical protein | PMI12_02564 | Not Available | Negative | 2678520 - 2679530 | 36922.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
