Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small protein a (tmrna-binding) | PMI12_02545 | Not Available | Positive | 2658294 - 2658857 | 20518.5 |
| dihydrodipicolinate reductase | PMI12_02546 | Not Available | Positive | 2659047 - 2659811 | 26799.3 |
| biopolymer transport protein | PMI12_02547 | Not Available | Positive | 2659826 - 2660521 | 23786.2 |
| biopolymer transport protein | PMI12_02548 | Not Available | Positive | 2660536 - 2661009 | 16343.7 |
| glycogen/starch/alpha-glucan phosphorylase | PMI12_02549 | Not Available | Negative | 2661145 - 2663628 | 93088.0 |
| glycogen/starch synthase, adp-glucose type | PMI12_02550 | Not Available | Negative | 2663765 - 2665234 | 52485.7 |
| hypothetical protein | PMI12_02551 | Not Available | Negative | 2665305 - 2665372 | 2393.77 |
| 3-hydroxyacyl-coa dehydrogenase | PMI12_02552 | Not Available | Positive | 2665460 - 2667568 | 75756.1 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_02553 | Not Available | Positive | 2667593 - 2669068 | 52536.4 |
| acetyl-coa acetyltransferase | PMI12_02554 | Not Available | Positive | 2669115 - 2670290 | 40837.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
