Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_02535 | Not Available | Positive | 2647655 - 2648686 | 37369.6 |
| abc-type dipeptide transport system, periplasmic component | PMI12_02536 | Not Available | Positive | 2648724 - 2650355 | 60849.8 |
| 5''-methylthioadenosine/s-adenosylhomocysteine nucleosidase | PMI12_02537 | Not Available | Positive | 2650359 - 2651126 | 26826.4 |
| putative membrane protein | PMI12_02538 | Not Available | Negative | 2651119 - 2651871 | 26603.6 |
| magnesium mg(2+) and cobalt co(2+) transport protein cora | PMI12_02539 | Not Available | Negative | 2651929 - 2652915 | 38000.5 |
| dna/rna helicase, superfamily i | PMI12_02540 | Not Available | Positive | 2653139 - 2655259 | 77599.0 |
| ribosomal subunit interface protein | PMI12_02541 | Not Available | Positive | 2655589 - 2655918 | 12715.2 |
| phosphotransferase system mannitol/fructose-specifc iia component (ntr-type) | PMI12_02542 | Not Available | Positive | 2656108 - 2656575 | 16438.0 |
| serine kinase of the hpr protein, regulates carbohydrate metabolism | PMI12_02543 | Not Available | Positive | 2656720 - 2657679 | 35518.2 |
| fe2+/zn2+ uptake regulation protein | PMI12_02544 | Not Available | Negative | 2657783 - 2658202 | 15925.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
