Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | PMI12_02525 | Not Available | Negative | 2637483 - 2638430 | 33857.5 |
| hypothetical protein | PMI12_02526 | Not Available | Positive | 2638594 - 2639088 | 17562.8 |
| nad-dependent aldehyde dehydrogenase | PMI12_02527 | Not Available | Positive | 2639085 - 2640635 | 53639.2 |
| benzoate-coa ligase family | PMI12_02528 | Not Available | Positive | 2640667 - 2642214 | 56295.1 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_02529 | Not Available | Positive | 2642369 - 2643184 | 30450.4 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02530 | Not Available | Positive | 2643312 - 2644481 | 41284.5 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_02531 | Not Available | Positive | 2644643 - 2645515 | 31417.7 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_02532 | Not Available | Positive | 2645512 - 2646462 | 33405.2 |
| hypothetical protein | PMI12_02533 | Not Available | Positive | 2646459 - 2646549 | 3033.63 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_02534 | Not Available | Positive | 2646550 - 2647658 | 39929.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
